PhytophthoraV1, Main, Exploration, bibRecord, 000406

Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves.

Identifieur interne : 000406 ( Main/Exploration ); précédent : 000405; suivant : 000407

Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves.

Auteurs : Svante Resjö [Suède] ; Muhammad Awais Zahid [Suède] ; Dharani Dhar Burra [Suède] ; Marit Lenman [Suède] ; Fredrik Levander [Suède] ; Erik Andreasson [Suède]

Source :

International journal of molecular sciences [ 1422-0067 ] ; 2019.

RBID : pubmed:31554174

Descripteurs français

KwdFr :
- Bases de données génétiques (MeSH), Biologie informatique (méthodes), Cartographie d'interactions entre protéines (MeSH), Feuilles de plante (immunologie), Feuilles de plante (métabolisme), Immunité des plantes (MeSH), Méthylation (MeSH), Protéines végétales (métabolisme), Protéome (MeSH), Protéomique (MeSH), Solanum tuberosum (immunologie), Solanum tuberosum (métabolisme), Spectrométrie de masse (MeSH).
MESH :
- immunologie : Feuilles de plante, Solanum tuberosum.
- métabolisme : Feuilles de plante, Protéines végétales, Solanum tuberosum.
- méthodes : Biologie informatique.
- Bases de données génétiques, Cartographie d'interactions entre protéines, Immunité des plantes, Méthylation, Protéome, Protéomique, Spectrométrie de masse.

English descriptors

KwdEn :
- Computational Biology (methods), Databases, Genetic (MeSH), Mass Spectrometry (MeSH), Methylation (MeSH), Plant Immunity (MeSH), Plant Leaves (immunology), Plant Leaves (metabolism), Plant Proteins (metabolism), Protein Interaction Mapping (MeSH), Proteome (MeSH), Proteomics (MeSH), Solanum tuberosum (immunology), Solanum tuberosum (metabolism).
MESH :
- chemical , metabolism : Plant Proteins.
- immunology : Plant Leaves, Solanum tuberosum.
- metabolism : Plant Leaves, Solanum tuberosum.
- methods : Computational Biology.
- Databases, Genetic, Mass Spectrometry, Methylation, Plant Immunity, Protein Interaction Mapping, Proteome, Proteomics.

Abstract

Plants have a variety of ways to defend themselves against pathogens. A commonly used model of the plant immune system is divided into a general response triggered by pathogen-associated molecular patterns (PAMPs), and a specific response triggered by effectors. The first type of response is known as PAMP triggered immunity (PTI), and the second is known as effector-triggered immunity (ETI). To obtain better insight into changes of protein abundance in immunity reactions, we performed a comparative proteomic analysis of a PTI and two different ETI models (relating to Phytophthora infestans) in potato. Several proteins showed higher abundance in all immune reactions, such as a protein annotated as sterol carrier protein 2 that could be interesting since Phytophthora species are sterol auxotrophs. RNA binding proteins also showed altered abundance in the different immune reactions. Furthermore, we identified some PTI-specific changes of protein abundance, such as for example, a glyoxysomal fatty acid beta-oxidation multifunctional protein and a MAR-binding protein. Interestingly, a lysine histone demethylase was decreased in PTI, and that prompted us to also analyze protein methylation in our datasets. The proteins upregulated explicitly in ETI included several catalases. Few proteins were regulated in only one of the ETI interactions. For example, histones were only downregulated in the ETI-Avr2 interaction, and a putative multiprotein bridging factor was only upregulated in the ETI-IpiO interaction. One example of a methylated protein that increased in the ETI interactions was a serine hydroxymethyltransferase.

DOI: 10.3390/ijms20194726
PubMed: 31554174
PubMed Central: PMC6802228

Affiliations:

Suède

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000377
to stream Main, to step Curation: 000377

Le document en format XML

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<front><div type="abstract" xml:lang="en">Plants have a variety of ways to defend themselves against pathogens. A commonly used model of the plant immune system is divided into a general response triggered by pathogen-associated molecular patterns (PAMPs), and a specific response triggered by effectors. The first type of response is known as PAMP triggered immunity (PTI), and the second is known as effector-triggered immunity (ETI). To obtain better insight into changes of protein abundance in immunity reactions, we performed a comparative proteomic analysis of a PTI and two different ETI models (relating to <i>Phytophthora infestans</i>
) in potato. Several proteins showed higher abundance in all immune reactions, such as a protein annotated as sterol carrier protein 2 that could be interesting since <i>Phytophthora</i>
 species are sterol auxotrophs. RNA binding proteins also showed altered abundance in the different immune reactions. Furthermore, we identified some PTI-specific changes of protein abundance, such as for example, a glyoxysomal fatty acid beta-oxidation multifunctional protein and a MAR-binding protein. Interestingly, a lysine histone demethylase was decreased in PTI, and that prompted us to also analyze protein methylation in our datasets. The proteins upregulated explicitly in ETI included several catalases. Few proteins were regulated in only one of the ETI interactions. For example, histones were only downregulated in the ETI-Avr2 interaction, and a putative multiprotein bridging factor was only upregulated in the ETI-IpiO interaction. One example of a methylated protein that increased in the ETI interactions was a serine hydroxymethyltransferase.</div>
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) in potato. Several proteins showed higher abundance in all immune reactions, such as a protein annotated as sterol carrier protein 2 that could be interesting since <i>Phytophthora</i>
 species are sterol auxotrophs. RNA binding proteins also showed altered abundance in the different immune reactions. Furthermore, we identified some PTI-specific changes of protein abundance, such as for example, a glyoxysomal fatty acid beta-oxidation multifunctional protein and a MAR-binding protein. Interestingly, a lysine histone demethylase was decreased in PTI, and that prompted us to also analyze protein methylation in our datasets. The proteins upregulated explicitly in ETI included several catalases. Few proteins were regulated in only one of the ETI interactions. For example, histones were only downregulated in the ETI-Avr2 interaction, and a putative multiprotein bridging factor was only upregulated in the ETI-IpiO interaction. One example of a methylated protein that increased in the ETI interactions was a serine hydroxymethyltransferase.</AbstractText>
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Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves.

Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves.

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